All events for the Kerman Lab

Meetings are cancelled

Start date: March 16, 2020 - End date: June 30, 2020

Time: 13:00-14:00

In the light of the Turkish Government’s cancellation of classes and meetings in the universities, we will not have our weekly lab meetings or journal clubs. The date for restarting the meetings will be evaluated according to the developments of the Covid-19 threat.

In the meantime, wash your hands, stay away from crowds, and be safe!

Journal Club-Ilayda

Date: March 9, 2020

Time: 13:30-14:30

Location: REMER seminar room

Journal Club

Ilayda will present the journal club this week. Paper TBA.

Lab Meeting-Tuba

Date: March 2, 2020

Time: 13:30-14:30

Location: REMER seminar room

Lab Meeting

Tuba will present her data on tracking the vesicle during myelination.

Note the change of the date. Lab meetings are moved to Mondays due to change in lecture schedule changes.

Journal Club – Emre

Date: February 27, 2020

Time: 13:00 - 14:00

Location: REMER seminar room

Journal Club

Emre will present the journal club this week.

Paper TBA.

Journal Club – Kubra

Date: February 13, 2020

Time: 13:00-14:00

Location: REMER seminar room

Journal Club

Kubra will present the journal club this week.

Paper TBA.

Journal Club-Burcu

Date: February 6, 2020

Time: 13:00-14:00

Location: REMER Seminar room

Journal Club

Burcu will present the journal club this week.

Paper TBD.

Lab Meeting – Zeynep

Date: January 16, 2020

Time: 13:00-14:00

Location: REMER seminar room

Lab Meeting

On this first lab meeting of 2020, Zeynep will present her data on oligodendrocyte-neuron contact sites.

Lab Meeting – Ilayda

Date: November 21, 2019

Time: 13:00-14:00

Location: REMER seminar room

Lab Meeting

Ilayda will practice her presentation for the upcoming Thesis Committee meeting.

Thesis Committee Meeting – Tuba

Date: November 14, 2019

Time: 13:00-14:00

Location: REMER seminar room

Thesis Defense

Tuba will describe her progress on her thesis research. So no lab meeting this week.

Journal Club-Tuba

Date: November 7, 2019

Time: 13:00-14:00

Location: REMER seminar room

Journal Club

This week, Tuba will present the journal club

Lab Meeting – Emre

Date: October 24, 2019

Time: 13:00-14:00

Location: REMER seminar room

Lab Meeting

Emre will lead the discussion on staining for and analysing the data from flow cytometry experiments

Lab Meeting-Burcu

Date: October 17, 2019

Time: 13:00-14:00

Location: REMER seminar room

Lab Meeting

This week Burcu will present her research on HRP3.

Note that with the new academic year the lab meetings will be on Thursdays at 13:00.

Lab Meeting – Katarina

Date: October 9, 2019

Time: 13:00-14:00

Location: Senate Meeting Room

Lab Meeting

Katarina who is doing her secondment as a part of AUTOIGG project will update us on her progress in our lab.

Note the change in date to Wednesday.

Lab Meeting – Kubra

Date: October 4, 2019

Time: 13:30-14:30

Location: REMER seminar room

Lab Meeting

Kubra will present her proposed project to us.

Note the time change to 13:30

MolBioKon2019

Date: September 27, 2019

Time: 13:45-15:15

Location: MolBioKon 2019

Lab Meeting

This week there won’t be a lab meeting as we attend the MolBioKon2019. Zeynep will be presenting her poster on Friday 27th between 13:45 and 15:15. Come and see her poster.

Journal Club-Zeynep

Date: September 13, 2019

Time: 13:00-14:00

Location: REMER seminar room

Journal Club

This week Zeynep will present the journal club. Paper TBA.

Journal Club-Ilayda

Date: September 6, 2019

Time: 13:00-14:00

Location: REMER seminar room

Journal Club

This week Ilayda will present the journal club. Paper TBA.

No Lab Meeting. It’s Victory Day.

Date: August 30, 2019

Time: 13:00-14:00

August 30 is the Victory Day for Turkey. We celebrate the victory at the Independence War that lead to today’s modern Turkey.

Lab Meeting-Tuba

Date: August 23, 2019

Time: 13:00-14:00

Location: REMER seminar room

Lab Meeting

This week Tuba will present her research on oligodendrocyte cellular trafficking.

Journal Club-Emre

Date: August 9, 2019

Time: 13:00-15:00

Location: REMER seminar room

Journal Club

This week Emre will present the journal club. Paper TBA.

Lab Meeting-Katarina

Date: August 2, 2019

Time: 13:00-14:00

Location: REMER seminar room

Lab Meeting

Katarina, who is our guest on her secondment via the Automated Functional Screening of IgGs for Diagnostics of Neurodegenerative Diseases (AUTOIGG, H2020-MSCA-RISE-2017 Proj. No. 778405) project, will present her research to us.

Journal Club-Burcu

Date: July 19, 2019

Time: 13:00-14:00

Location: REMER seminar room

Journal Club

This week Burcu will present the journal club. Paper TBA.

Lab Meeting-Zeynep

Date: July 5, 2019

Time: 13:00-14:00

Location: REMER seminar room

Lab Meeting

Zeynep will present her work on monitoring contact between oligodendrocytes and neurons.

Note the date change to Fridays.

Journal Club-Kubra

Date: June 19, 2019

Time: 14:00-15:00

Location: REMER seminar room

Journal Club

This week Kubra will present the following paper: ” A 3D human triculture system modeling neurodegeneration and neuroinflammation in Alzheimer’s disease” by Park et al. Nature Neuroscience 21, 941–951 (2018).

Lab Meeting-Ilayda

Date: May 29, 2019

Time: 14:00-15:00

Location: REMER seminar room

Lab Meeting

Ilayda will present new findings from the interactome analysis

Journal club-Tuba

Date: May 22, 2019

Time: 14:00-15:00

Location: REMER seminar room

Journal Club

This week’s journal club will be presented by Tuba.

The paper being discussed: Aging restricts the ability of mesenchymal stem cells to promote the generation of oligodendrocytes during remyelination. Glia. 2019 Apr 30. doi: 10.1002/glia.23624.

Lab Meeting-Bilal

Date: May 8, 2019

Time: 14:00-15:00

Location: REMER seminar room

Bilal will recap the progress in the lab.

No lab meeting due to Labor Day Holiday

Date: May 1, 2019

Time: 14:00-15:00

May 1st is the International Workers’ Day and is celebrated as a holiday in Turkey as well as many other countries.

Lab Meeting-Emre

Date: April 24, 2019

Time: 14:00-15:00

Location: REMER seminar room

Emre will talk about latest results from cell sorting.

Journal club-Burcu

Date: April 10, 2019

Time: 14:00-15:00

Location: REMER seminar room

This week’s journal club will be presented by Burcu.

The paper being discussed: TBA.

Lab Meeting-Kubra

Date: April 3, 2019

Time: 14:00-15:00

Location: REMER seminar room

Lab Meeting

Kubra will present her plans for her thesis project which will combine wet lab work with bioinformatics.

No Lab Meeting

Date: March 27, 2019

Time: 14:00-15:00

Lab Meeting

Due to grant application deadline, Kubra’s lab meeting is postponed to next week.

Journal club-Zeynep

Date: March 20, 2019

Time: 14:00-15:00

Location: REMER Seminar room

Journal Club

This week’s journal club will be presented by Zeynep

The paper being discussed: TBA.

Journal club-Ilayda

Date: March 13, 2019

Time: 14:00-15:00

Location: REMER Seminar room

Journal Club

This week’s journal club will be presented by Ilayda.

The paper being discussed: TBA.

Lab Meeting-Tuba

Date: March 6, 2019

Time: 14:00-15:00

Location: REMER seminar room

Lab Meeting

Tuba will present her progress on vesicle trafficking.

Journal club-Emre

Date: February 27, 2019

Time: 14:00-15:00

Location: REMER seminar room

Journal Club

This week’s journal club will be presented by Emre.

The paper being discussed: TBA.

Lab Meeting-Burcu

Date: February 20, 2019

Time: 14:00-15:00

Location: REMER seminar room

Lab Meeting

Burcu will present her progress during her secondment in Belgrade.

Nothe the day change! From now on, lab meetings and journal clubs will be on Wednesdays at 14:00.

Journal Club-Kubra

Date: February 15, 2019

Time: 14:00-16:00

Location: REMER seminar room

This week’s journal club will be presented by Kubra.

The paper being discussed: “PRMT5-mediated regulation of developmental myelination” Nat Commun. 2018 Jul 19;9(1):2840. doi: 10.1038/s41467-018-04863-9.

Lab Meeting-Andrej

Date: February 1, 2019

Time: 10:00-12:00

Location: REMER seminar room

Lab Meeting

Dr. Andrej Korenic, who is visiting us from the Department of Biology at the University of Belgrade on his secondment via the Automated Functional Screening of IgGs for Diagnostics of Neurodegenerative Diseases (AUTOIGG, H2020-MSCA-RISE-2017 Proj. No. 778405) project, will present his research to us.

NOTE THE TIME CHANGE TO 10:00

No Lab Meeting

Date: January 25, 2019

Time: 14:00-16:00

Location: Remer Seminar Room

Lab Meeting

This week’s lab meeting is postponed due to the exams week.

Best of luck to all students!

Lab Meeting-Zeynep

Date: January 18, 2019

Time: 14:00-16:00

Location: REMER seminar room

Lab Meeting

Zeynep will present her work on cloning.

Lab Meeting-Lidija

Date: January 11, 2019

Time: 14:00-15:00

Location: REMER Seminar Room

Lab Meeting

Prof. Lidija Radenović, who is visiting us from the Department of Biology at the University of Belgrade on her secondment via the Automated Functional Screening of IgGs for Diagnostics of Neurodegenerative Diseases (AUTOIGG, H2020-MSCA-RISE-2017 Proj. No. 778405) project, will present her research to us.

Lab Meeting-2018 Wrap up

Date: December 28, 2018

Time: 14:00-15:00

Location: REMER Seminar Room

Lab Meeting

We will wrap up the year with a discussion of 2018. How did we progress? Any stumbling points? What is waiting for us in 2019?

Season’s greetings! Happy new year!

Journal Club-Tuba

Date: December 21, 2018

Time: 14:00-15:00

Location: REMER Seminar Room

This week’s journal club will be presented by Tuba.

The paper being discussed is: TBA

Lab Meeting-Nese

Date: December 14, 2018

Time: 13:00-14:00

Location: REMER Seminar Room

Lab Meeting

Nese will present her progress and experience during her secondment to FBUB as a part of the Automated Functional Screening of IgGs for Diagnostics of Neurodegenerative Diseases (AUTOIGG, H2020-MSCA-RISE-2017 Proj. No. 778405) project.

Esref’s Thesis Defense

Date: December 10, 2018

Time: 10:00-12:00

Location: TBD

Thesis Defense

Esref is defending his Master thesis titled “Myelin Interactome: Identification of Cell-Cell Interactions in Multiple Sclerosis with Binary Graf Based Protein-Protein Interaction Networks” All are welcome.

Lab Meeting-Entire lab

Date: December 7, 2018

Time: 14:00-15:00

Location: REMER Seminar Room

Lab Meeting

As we welcome Lidija to our lab, we will share a wrap-up of the ongoing progress in the lab.

No Lab Meeting due to TUBA Meeting

Date: November 30, 2018

Time: 14:00-15:00

Bilal will be at the Turkish Academy of Sciences yearly meeting for the recipients of the Young Investigator Award.

Journal Club-Muhammet

Date: November 23, 2018

Time: 14:00-15:00

Location: REMER Seminar Room

Journal Club

This week’s journal club will be presented by Muhammet.

The paper being discussed is: “Regulatory role of oligodendrocyte gap junctions in inflammatory demyelination”

Glia. 2018 Oct 16. doi: 10.1002/glia.23513

Lab Meeting-Ilayda

Date: November 16, 2018

Time: 14:00-15:00

Location: REMER Seminar Room

Lab Meeting

Ilayda will talk about recent MS patient data and interactome analysis.

Lab Meeting-Entire lab

Date: November 9, 2018

Time: 13:00-14:00

Location: REMER Seminar Room

Lab Meeting

This week’s lab meeting will be a wrap-up of the ongoing progress in the lab.

Lab Meeting-Esref

Date: November 2, 2018

Time: 14:00-15:00

Location: REMER Seminar Room

Lab Meeting

Eşref will present a draft of his thesis on myelin interactome.

Note the time change to 2pm for this and all the following lab meetings

Lab Meeting-Emre

Date: October 26, 2018

Time: 13:00-14:00

Location: REMER Seminar Room

Lab Meeting

Emre will explain the inner workings of the FACS and how we can incorporate it more to our research. Note the time change to 1pm.

Lab Meeting-Emre

Date: October 19, 2018

Time: 10:00-11:00

Location: REMER Seminar Room

Lab Meeting

Due to the flu season the lab meeting is posponed!

Emre will explain the inner workings of the FACS and how we can incorporate it more to our research.

No lab meeting this week

Date: October 12, 2018

Time: 10:00-11:00

There won’t be a lab meeting this week because Bilal will be at the International School of Medicine 7th committee exam.

Journal Club-Zeynep

Date: October 5, 2018

Time: 10:00-11:00

Location: REMER Seminar Room

Journal Club

This week’s journal club will be presented by Zeynep. 


The paper being discussed is: “Hyaluronan blocks oligodendrocyte progenitor maturation and remyelination through TLR2”

Proc Natl Acad Sci U S A. 2010 Jun 22;107(25):11555-60. doi: 10.1073/pnas.1006496107

Bilal is proud to be a presenter at the Prof. Dr. Mustafa Karaman Biomedical Image Processing Workshop organized by Istanbul Technical University Information Institute. He will be talking about machine learning in myelin quantification.

Lab Meeting-Burcu

Date: September 21, 2018

Time: 10:00-11:00

Location: REMER Seminar Room

Research update presented by Burcu. Her last lab meeting before she leaves for Belgrade.

Lab Meeting-Tuba

Date: September 14, 2018

Time: 10:00-11:00

Location: REMER Seminar Room

Research update presented by Tuba

Lab Meeting-Ilayda

Date: September 7, 2018

Time: 9:30-11:00

Location: REMER Seminar Room

Research update presented by Ilayda

No Lab Meeting

Date: August 31, 2018

Time: 10.00-11.00

This week there will be no lab meeting as Bilal will be attending the thesis defense of Deniz Ugurlu at the Koc University.

No Lab Meeting this week

Date: August 17, 2018

Time: 10:00-11:00

Location: REMER Seminar Room

We will be attending Nazli‘s thesis defense so there won’t be a lab meeting. Congratulations to Nazli!

Journal Club-Burcu

Date: August 10, 2018

Time: 10:00-11:00

Location: REMER Seminar Room

Biweekly journal club presented by Bilal. Note the time change!

The paper being discussed is:

“Ephrin‐A1‐EphA4 signaling negatively regulates myelination in the central nervous system”

Glia. 2018 May;66(5):934-950. doi: 10.1002/glia.23293. Epub 2018 Jan 19.

Lab Meeting-Whole lab

Date: August 3, 2018

Time: 9:30-11:00

Location: REMER Seminar Room

Lab Meeting

Bilal is back from secondment. Meetings will restart with a general catching up meeting. Everyone will present their research updates and Bilal will share his experience in University of Belgrade.

No meetings during Bilal’s secondment

Start date: June 1, 2018 - End date: August 1, 2018

There will be no lab meetings and journal clubs during Bilal’s secondment at the University of Belgrade. They will restart after in August. The secondment is a part of the AUTOIGG project.

Journal Club-Bilal

Date: May 18, 2018

Time: 13:30 - 14:30

Location: REMER Seminar Room

Journal Club

Biweekly journal club presented by Bilal. Note the time change!

The paper being discussed is:

“Biochemically altered myelin triggers autoimmune demyelination”

Proc Natl Acad Sci U S A. 2018 May 4. pii: 201721115. doi: 10.1073/pnas.1721115115.

Lab Meeting-Nese

Date: May 11, 2018

Time: 9:30-11:00

Location: REMER Seminar Room

Lab Meeting

Nese will bring us all up to speed on AUTOIGG.

Lab Meeting-Whole lab

Date: May 4, 2018

Time: 9:30-11:00

Location: REMER Seminar Room

Lab Meeting

This week, everyone will present their research updates in order to bring us all up to speed.

Journal Club-Burcu

Date: April 27, 2018

Time: 13:30 - 14:30

Location: REMER Seminar Room

Journal Club

Biweekly journal club presented by Burcu.

The paper being discussed is:

“Lineage tracing reveals dynamic changes in oligodendrocyte precursor cells following cuprizone-induced demyelination”

Glia. 2017 Dec;65(12):2087-2098. doi: 10.1002/glia.23229.

Note the time change for this week.

Lab Meeting-Tuba

Date: April 20, 2018

Time: 9:30-11:00

Location: REMER Seminar Room

Lab Meeting

Biweekly research update presented by Tuba

Journal Club-Ilayda

Date: April 6, 2018

Time: 10:00 - 11:00

Location: REMER Seminar Room

Journal Club

Biweekly journal club presented by Ilayda

The paper being discussed is:

“Sox2 expression in Schwann cells inhibits myelination in vivo
and induces influx of macrophages to the nerve”

Development. 2017 Sep 1;144(17):3114-3125. doi: 10.1242/dev.150656.

 

Lab Meeting-Burcu

Date: March 30, 2018

Time: 10:00 - 11:00

Location: REMER Seminar Room

Lab Meeting

Biweekly research update presented by Burcu

Parkinson Hastalığı ve Normal Bilişten Demansa Biyobelirteçler

Date: March 27, 2018

Time: 09:00 - 17:00

Location: Medipol University South Campus Konferans Room

Seminar

Seminar on Parkinson Disease by Istanbul Medipol University

 

Journal Club-Zeynep

Date: March 23, 2018

Time: 09:30- 10:30

Location: REMER Seminar Room

Journal Club

Biweekly journal club presented by Zeynep

The paper being discussed is:

“LINGO-1 Regulates Oligodendrocyte Differentiation through
the Cytoplasmic Gelsolin Signaling Pathway”

The Journal of Neuroscience, March 22, 2017 • 37(12):3127–3137 • 3127

REMER Seminar

Date: March 20, 2018

Time: 16:00 - 17:00

Location: REMER Seminar Room

Seminar

Department Seminar – Presenter: Bilal Kerman